Protein–RNA interactions for Protein: Q8K2P7

Slc38a1, Sodium-coupled neutral amino acid transporter 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a1Q8K2P7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc38a1Q8K2P7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc38a1Q8K2P7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Slc38a1Q8K2P7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.87■□□□□ 0.45
Slc38a1Q8K2P7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc38a1Q8K2P7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Gm13238-201ENSMUST00000117655 780 ntBASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slc38a1Q8K2P7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc38a1Q8K2P7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc38a1Q8K2P7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slc38a1Q8K2P7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Slc38a1Q8K2P7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc38a1Q8K2P7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Gm5921-201ENSMUST00000075898 882 ntBASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Slc38a1Q8K2P7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Gm43566-201ENSMUST00000196851 808 ntBASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slc38a1Q8K2P7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc38a1Q8K2P7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc38a1Q8K2P7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc38a1Q8K2P7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc38a1Q8K2P7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc38a1Q8K2P7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc38a1Q8K2P7 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.78■□□□□ 0.44
Slc38a1Q8K2P7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc38a1Q8K2P7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms