Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trnt1Q8K1J6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trnt1Q8K1J6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trnt1Q8K1J6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trnt1Q8K1J6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trnt1Q8K1J6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trnt1Q8K1J6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trnt1Q8K1J6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trnt1Q8K1J6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trnt1Q8K1J6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trnt1Q8K1J6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 Rps24-207ENSMUST00000224568 714 ntBASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trnt1Q8K1J6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Gm22238-201ENSMUST00000175222 88 ntBASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
Trnt1Q8K1J6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trnt1Q8K1J6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Gm14117-201ENSMUST00000122417 843 ntBASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trnt1Q8K1J6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trnt1Q8K1J6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trnt1Q8K1J6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trnt1Q8K1J6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trnt1Q8K1J6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnt1Q8K1J6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trnt1Q8K1J6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnt1Q8K1J6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnt1Q8K1J6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trnt1Q8K1J6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.5■□□□□ 0.71
Trnt1Q8K1J6 Gm43530-201ENSMUST00000195920 274 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms