Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4Q8BQZ5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf4Q8BQZ5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf4Q8BQZ5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf4Q8BQZ5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf4Q8BQZ5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf4Q8BQZ5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf4Q8BQZ5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf4Q8BQZ5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf4Q8BQZ5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf4Q8BQZ5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.5■□□□□ 0.71
Cpsf4Q8BQZ5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf4Q8BQZ5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cpsf4Q8BQZ5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4Q8BQZ5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4Q8BQZ5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4Q8BQZ5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf4Q8BQZ5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.49■□□□□ 0.71
Cpsf4Q8BQZ5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
Cpsf4Q8BQZ5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf4Q8BQZ5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf4Q8BQZ5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf4Q8BQZ5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf4Q8BQZ5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4Q8BQZ5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4Q8BQZ5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4Q8BQZ5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cpsf4Q8BQZ5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4Q8BQZ5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms