Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp8Q80U87 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp8Q80U87 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp8Q80U87 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp8Q80U87 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp8Q80U87 Gm10232-201ENSMUST00000089221 720 ntBASIC20.16■□□□□ 0.82
Usp8Q80U87 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp8Q80U87 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp8Q80U87 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.16■□□□□ 0.82
Usp8Q80U87 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp8Q80U87 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp8Q80U87 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp8Q80U87 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp8Q80U87 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp8Q80U87 Gm10399-202ENSMUST00000202768 748 ntBASIC20.15■□□□□ 0.82
Usp8Q80U87 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Usp8Q80U87 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp8Q80U87 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp8Q80U87 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Usp8Q80U87 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Usp8Q80U87 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp8Q80U87 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp8Q80U87 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp8Q80U87 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp8Q80U87 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp8Q80U87 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp8Q80U87 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Usp8Q80U87 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.14■□□□□ 0.81
Usp8Q80U87 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp8Q80U87 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp8Q80U87 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp8Q80U87 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Usp8Q80U87 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Usp8Q80U87 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp8Q80U87 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp8Q80U87 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Usp8Q80U87 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp8Q80U87 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp8Q80U87 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp8Q80U87 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Usp8Q80U87 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp8Q80U87 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp8Q80U87 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp8Q80U87 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp8Q80U87 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp8Q80U87 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp8Q80U87 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Usp8Q80U87 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp8Q80U87 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp8Q80U87 Golph3-202ENSMUST00000226517 2359 ntBASIC20.1■□□□□ 0.81
Usp8Q80U87 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.1■□□□□ 0.81
Usp8Q80U87 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp8Q80U87 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp8Q80U87 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp8Q80U87 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp8Q80U87 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.09■□□□□ 0.81
Usp8Q80U87 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.09■□□□□ 0.81
Usp8Q80U87 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp8Q80U87 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Usp8Q80U87 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp8Q80U87 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp8Q80U87 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp8Q80U87 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp8Q80U87 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Usp8Q80U87 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Usp8Q80U87 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp8Q80U87 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Usp8Q80U87 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp8Q80U87 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp8Q80U87 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp8Q80U87 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp8Q80U87 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp8Q80U87 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp8Q80U87 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp8Q80U87 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp8Q80U87 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp8Q80U87 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms