Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Rpap1Q80TE0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Rpap1Q80TE0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Rpap1Q80TE0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Rpap1Q80TE0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Rpap1Q80TE0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
Rpap1Q80TE0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Rpap1Q80TE0 Gm43403-201ENSMUST00000198011 1786 ntBASIC31.94■■■□□ 2.7
Rpap1Q80TE0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC31.94■■■□□ 2.7
Rpap1Q80TE0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC31.94■■■□□ 2.7
Rpap1Q80TE0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rpap1Q80TE0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rpap1Q80TE0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rpap1Q80TE0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Rpap1Q80TE0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC31.93■■■□□ 2.7
Rpap1Q80TE0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC31.93■■■□□ 2.7
Rpap1Q80TE0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC31.93■■■□□ 2.7
Rpap1Q80TE0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Rpap1Q80TE0 Gm42778-201ENSMUST00000199644 553 ntBASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC31.92■■■□□ 2.7
Rpap1Q80TE0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC31.91■■■□□ 2.7
Rpap1Q80TE0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
Rpap1Q80TE0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Gm5913-201ENSMUST00000119397 1399 ntBASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rpap1Q80TE0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC31.89■■■□□ 2.7
Rpap1Q80TE0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rpap1Q80TE0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rpap1Q80TE0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rpap1Q80TE0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rpap1Q80TE0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Rpap1Q80TE0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
Rpap1Q80TE0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Rpap1Q80TE0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Rpap1Q80TE0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Rpap1Q80TE0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Rpap1Q80TE0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC31.87■■■□□ 2.69
Rpap1Q80TE0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC31.87■■■□□ 2.69
Rpap1Q80TE0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Rpap1Q80TE0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC31.86■■■□□ 2.69
Rpap1Q80TE0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Rpap1Q80TE0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Rpap1Q80TE0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Rpap1Q80TE0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Rpap1Q80TE0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Rpap1Q80TE0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rpap1Q80TE0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Rpap1Q80TE0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
Rpap1Q80TE0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Rpap1Q80TE0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC31.82■■■□□ 2.68
Rpap1Q80TE0 Gm10602-201ENSMUST00000098239 609 ntBASIC31.82■■■□□ 2.68
Rpap1Q80TE0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Rpap1Q80TE0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Rpap1Q80TE0 Gm12933-201ENSMUST00000120203 872 ntBASIC31.81■■■□□ 2.68
Rpap1Q80TE0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC31.81■■■□□ 2.68
Rpap1Q80TE0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Rpap1Q80TE0 Gm37415-201ENSMUST00000192265 2054 ntBASIC31.8■■■□□ 2.68
Rpap1Q80TE0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Rpap1Q80TE0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC31.8■■■□□ 2.68
Rpap1Q80TE0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
Rpap1Q80TE0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rpap1Q80TE0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Rpap1Q80TE0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC31.78■■■□□ 2.68
Rpap1Q80TE0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Rpap1Q80TE0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rpap1Q80TE0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rpap1Q80TE0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rpap1Q80TE0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Rpap1Q80TE0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Rpap1Q80TE0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Rpap1Q80TE0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Rpap1Q80TE0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Rpap1Q80TE0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Rpap1Q80TE0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms