Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim17Q7TPM3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim17Q7TPM3 Gm42642-201ENSMUST00000200683 355 ntBASIC20.93■□□□□ 0.94
Trim17Q7TPM3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim17Q7TPM3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim17Q7TPM3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim17Q7TPM3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.92■□□□□ 0.94
Trim17Q7TPM3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim17Q7TPM3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.91■□□□□ 0.94
Trim17Q7TPM3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.91■□□□□ 0.94
Trim17Q7TPM3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.91■□□□□ 0.94
Trim17Q7TPM3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim17Q7TPM3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim17Q7TPM3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim17Q7TPM3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim17Q7TPM3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim17Q7TPM3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Gm40848-201ENSMUST00000221998 324 ntBASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim17Q7TPM3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim17Q7TPM3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Gm10849-201ENSMUST00000100397 618 ntBASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim17Q7TPM3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim17Q7TPM3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim17Q7TPM3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms