Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gm8495-201ENSMUST00000188740 694 ntBASIC21.3■■□□□ 1
Prrt3Q6PE13 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prrt3Q6PE13 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
Prrt3Q6PE13 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Prrt3Q6PE13 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.3■■□□□ 1
Prrt3Q6PE13 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Prrt3Q6PE13 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prrt3Q6PE13 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prrt3Q6PE13 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prrt3Q6PE13 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prrt3Q6PE13 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
Prrt3Q6PE13 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.29■■□□□ 1
Prrt3Q6PE13 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Prrt3Q6PE13 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Prrt3Q6PE13 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Prrt3Q6PE13 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prrt3Q6PE13 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Prrt3Q6PE13 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Prrt3Q6PE13 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.28■■□□□ 1
Prrt3Q6PE13 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.28■■□□□ 1
Prrt3Q6PE13 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prrt3Q6PE13 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Prrt3Q6PE13 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prrt3Q6PE13 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prrt3Q6PE13 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.27■■□□□ 1
Prrt3Q6PE13 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prrt3Q6PE13 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.27■■□□□ 1
Prrt3Q6PE13 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Prrt3Q6PE13 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prrt3Q6PE13 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prrt3Q6PE13 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Spcs1-204ENSMUST00000226782 949 ntBASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prrt3Q6PE13 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt3Q6PE13 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt3Q6PE13 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt3Q6PE13 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt3Q6PE13 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.24■□□□□ 0.99
Prrt3Q6PE13 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt3Q6PE13 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt3Q6PE13 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prrt3Q6PE13 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prrt3Q6PE13 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prrt3Q6PE13 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.23■□□□□ 0.99
Prrt3Q6PE13 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.23■□□□□ 0.99
Prrt3Q6PE13 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.23■□□□□ 0.99
Prrt3Q6PE13 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Prrt3Q6PE13 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prrt3Q6PE13 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prrt3Q6PE13 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.22■□□□□ 0.99
Prrt3Q6PE13 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt3Q6PE13 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prrt3Q6PE13 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt3Q6PE13 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt3Q6PE13 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt3Q6PE13 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.19■□□□□ 0.98
Prrt3Q6PE13 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Prrt3Q6PE13 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prrt3Q6PE13 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prrt3Q6PE13 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prrt3Q6PE13 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prrt3Q6PE13 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prrt3Q6PE13 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms