Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtl3Q6P1Y1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rtl3Q6P1Y1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtl3Q6P1Y1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtl3Q6P1Y1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Rtl3Q6P1Y1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Gm43530-201ENSMUST00000195920 274 ntBASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtl3Q6P1Y1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtl3Q6P1Y1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl3Q6P1Y1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtl3Q6P1Y1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl3Q6P1Y1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl3Q6P1Y1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rtl3Q6P1Y1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl3Q6P1Y1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rtl3Q6P1Y1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rtl3Q6P1Y1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rtl3Q6P1Y1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rtl3Q6P1Y1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Rtl3Q6P1Y1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rtl3Q6P1Y1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rtl3Q6P1Y1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rtl3Q6P1Y1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rtl3Q6P1Y1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtl3Q6P1Y1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtl3Q6P1Y1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtl3Q6P1Y1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rtl3Q6P1Y1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rtl3Q6P1Y1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms