Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mir5133-201ENSMUST00000174955 77 ntBASIC19.36■□□□□ 0.69
VcanQ62059 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.36■□□□□ 0.69
VcanQ62059 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VcanQ62059 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VcanQ62059 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VcanQ62059 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VcanQ62059 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VcanQ62059 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VcanQ62059 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VcanQ62059 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VcanQ62059 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VcanQ62059 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
VcanQ62059 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VcanQ62059 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VcanQ62059 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VcanQ62059 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VcanQ62059 Gm37856-201ENSMUST00000191634 999 ntBASIC19.33■□□□□ 0.68
VcanQ62059 Gm20049-201ENSMUST00000219950 730 ntBASIC19.33■□□□□ 0.68
VcanQ62059 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VcanQ62059 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
VcanQ62059 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VcanQ62059 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VcanQ62059 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VcanQ62059 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VcanQ62059 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VcanQ62059 Gm10812-201ENSMUST00000099864 546 ntBASIC19.32■□□□□ 0.68
VcanQ62059 Reep4-203ENSMUST00000226563 1444 ntBASIC19.32■□□□□ 0.68
VcanQ62059 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VcanQ62059 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VcanQ62059 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VcanQ62059 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VcanQ62059 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.31■□□□□ 0.68
VcanQ62059 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VcanQ62059 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.31■□□□□ 0.68
VcanQ62059 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VcanQ62059 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.3■□□□□ 0.68
VcanQ62059 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
VcanQ62059 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VcanQ62059 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VcanQ62059 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.29■□□□□ 0.68
VcanQ62059 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VcanQ62059 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VcanQ62059 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.29■□□□□ 0.68
VcanQ62059 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.29■□□□□ 0.68
VcanQ62059 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VcanQ62059 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VcanQ62059 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VcanQ62059 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VcanQ62059 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VcanQ62059 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VcanQ62059 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.27■□□□□ 0.68
VcanQ62059 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VcanQ62059 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
VcanQ62059 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.27■□□□□ 0.67
VcanQ62059 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.27■□□□□ 0.67
VcanQ62059 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VcanQ62059 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.26■□□□□ 0.67
VcanQ62059 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VcanQ62059 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VcanQ62059 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VcanQ62059 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.25■□□□□ 0.67
VcanQ62059 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VcanQ62059 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms