Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FAM78BQ5VT40 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM78BQ5VT40 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM78BQ5VT40 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 RNF126P1-201ENST00000567452 1320 ntBASIC17.8■□□□□ 0.44
FAM78BQ5VT40 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM78BQ5VT40 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FAM78BQ5VT40 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 AC137767.1-201ENST00000602918 1920 ntBASIC17.78■□□□□ 0.44
FAM78BQ5VT40 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 AC007375.3-201ENST00000600936 2314 ntBASIC17.78■□□□□ 0.44
FAM78BQ5VT40 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FAM78BQ5VT40 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FAM78BQ5VT40 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FAM78BQ5VT40 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.77■□□□□ 0.43
FAM78BQ5VT40 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
FAM78BQ5VT40 GUSBP5-202ENST00000510805 1989 ntBASIC17.77■□□□□ 0.43
FAM78BQ5VT40 SLC25A24-204ENST00000569674 2357 ntBASIC17.76■□□□□ 0.43
FAM78BQ5VT40 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 LINC00526-201ENST00000581067 1875 ntBASIC17.76■□□□□ 0.43
FAM78BQ5VT40 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FAM78BQ5VT40 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms