Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.85■□□□□ 0.13
Trp53rkaQ5U452 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trp53rkaQ5U452 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trp53rkaQ5U452 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trp53rkaQ5U452 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trp53rkaQ5U452 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trp53rkaQ5U452 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trp53rkaQ5U452 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.82■□□□□ 0.12
Trp53rkaQ5U452 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Mir3960-201ENSMUST00000198213 73 ntBASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trp53rkaQ5U452 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trp53rkaQ5U452 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Trp53rkaQ5U452 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms