Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col10a1Q05306 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col10a1Q05306 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col10a1Q05306 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col10a1Q05306 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col10a1Q05306 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.62■□□□□ 0.57
Col10a1Q05306 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.62■□□□□ 0.57
Col10a1Q05306 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Gm9847-201ENSMUST00000052528 599 ntBASIC18.62■□□□□ 0.57
Col10a1Q05306 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col10a1Q05306 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col10a1Q05306 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col10a1Q05306 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col10a1Q05306 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col10a1Q05306 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col10a1Q05306 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col10a1Q05306 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col10a1Q05306 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Col10a1Q05306 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col10a1Q05306 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col10a1Q05306 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col10a1Q05306 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.6■□□□□ 0.57
Col10a1Q05306 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Col10a1Q05306 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Golgb1-201ENSMUST00000023534 498 ntBASIC18.6■□□□□ 0.57
Col10a1Q05306 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col10a1Q05306 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col10a1Q05306 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col10a1Q05306 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.59■□□□□ 0.57
Col10a1Q05306 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col10a1Q05306 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.59■□□□□ 0.57
Col10a1Q05306 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col10a1Q05306 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col10a1Q05306 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col10a1Q05306 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.58■□□□□ 0.56
Col10a1Q05306 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col10a1Q05306 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col10a1Q05306 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.57■□□□□ 0.56
Col10a1Q05306 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Gm43530-201ENSMUST00000195920 274 ntBASIC18.57■□□□□ 0.56
Col10a1Q05306 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.57■□□□□ 0.56
Col10a1Q05306 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col10a1Q05306 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col10a1Q05306 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Col10a1Q05306 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col10a1Q05306 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col10a1Q05306 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col10a1Q05306 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.56■□□□□ 0.56
Col10a1Q05306 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col10a1Q05306 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col10a1Q05306 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col10a1Q05306 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Col10a1Q05306 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col10a1Q05306 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms