Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
COL15A1P39059 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL15A1P39059 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL15A1P39059 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL15A1P39059 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.91■■■□□ 2.22
COL15A1P39059 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL15A1P39059 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL15A1P39059 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL15A1P39059 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
COL15A1P39059 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.91■■■□□ 2.22
COL15A1P39059 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.91■■■□□ 2.22
COL15A1P39059 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.91■■■□□ 2.22
COL15A1P39059 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL15A1P39059 AC142381.3-201ENST00000568208 1670 ntBASIC28.91■■■□□ 2.22
COL15A1P39059 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL15A1P39059 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL15A1P39059 AP003733.4-201ENST00000623785 1697 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
COL15A1P39059 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
COL15A1P39059 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.9■■■□□ 2.22
COL15A1P39059 AC034268.1-201ENST00000441047 882 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL15A1P39059 pRNA.6-201ENST00000610482 90 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 pRNA.5-201ENST00000612139 90 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 pRNA.11-201ENST00000618423 90 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 pRNA.13-201ENST00000619112 90 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.9■■■□□ 2.22
COL15A1P39059 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL15A1P39059 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
COL15A1P39059 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL15A1P39059 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.9■■■□□ 2.22
COL15A1P39059 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.89■■■□□ 2.22
COL15A1P39059 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.89■■■□□ 2.22
COL15A1P39059 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 AL161729.1-201ENST00000604104 1402 ntBASIC28.89■■■□□ 2.22
COL15A1P39059 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL15A1P39059 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.21
COL15A1P39059 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
COL15A1P39059 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.89■■■□□ 2.21
COL15A1P39059 YBX1P1-201ENST00000445822 960 ntBASIC28.88■■■□□ 2.21
COL15A1P39059 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.88■■■□□ 2.21
COL15A1P39059 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL15A1P39059 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.88■■■□□ 2.21
COL15A1P39059 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.88■■■□□ 2.21
COL15A1P39059 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.88■■■□□ 2.21
COL15A1P39059 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL15A1P39059 SLC47A1P1-202ENST00000449666 945 ntBASIC28.88■■■□□ 2.21
COL15A1P39059 AC126544.1-201ENST00000580842 1059 ntBASIC28.88■■■□□ 2.21
COL15A1P39059 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.87■■■□□ 2.21
COL15A1P39059 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL15A1P39059 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL15A1P39059 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL15A1P39059 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL15A1P39059 IKBKGP1-201ENST00000612193 1073 ntBASIC28.87■■■□□ 2.21
COL15A1P39059 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL15A1P39059 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL15A1P39059 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL15A1P39059 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL15A1P39059 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL15A1P39059 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.86■■■□□ 2.21
COL15A1P39059 AC020928.2-201ENST00000588717 2197 ntBASIC28.86■■■□□ 2.21
COL15A1P39059 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL15A1P39059 KRT18P5-201ENST00000436075 1291 ntBASIC28.86■■■□□ 2.21
COL15A1P39059 TSPY26P-201ENST00000476365 1326 ntBASIC28.86■■■□□ 2.21
COL15A1P39059 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.86■■■□□ 2.21
COL15A1P39059 HLA-L-211ENST00000482052 1765 ntBASIC28.85■■■□□ 2.21
COL15A1P39059 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL15A1P39059 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL15A1P39059 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
COL15A1P39059 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL15A1P39059 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.85■■■□□ 2.21
COL15A1P39059 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.85■■■□□ 2.21
COL15A1P39059 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.85■■■□□ 2.21
COL15A1P39059 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.85■■■□□ 2.21
COL15A1P39059 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL15A1P39059 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
COL15A1P39059 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
COL15A1P39059 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.84■■■□□ 2.21
COL15A1P39059 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
COL15A1P39059 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.84■■■□□ 2.21
COL15A1P39059 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.84■■■□□ 2.21
COL15A1P39059 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL15A1P39059 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL15A1P39059 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL15A1P39059 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.83■■■□□ 2.21
COL15A1P39059 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL15A1P39059 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL15A1P39059 AC090192.1-201ENST00000517740 490 ntBASIC28.83■■■□□ 2.21
COL15A1P39059 RARRES2P11-201ENST00000635158 484 ntBASIC28.83■■■□□ 2.21
COL15A1P39059 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL15A1P39059 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL15A1P39059 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
COL15A1P39059 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL15A1P39059 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms