Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdh4P39038 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Cdh4P39038 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh4P39038 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh4P39038 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh4P39038 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh4P39038 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cdh4P39038 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.31■□□□□ 0.68
Cdh4P39038 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.31■□□□□ 0.68
Cdh4P39038 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh4P39038 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh4P39038 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh4P39038 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh4P39038 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.3■□□□□ 0.68
Cdh4P39038 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh4P39038 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh4P39038 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh4P39038 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Cdh4P39038 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Cdh4P39038 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.29■□□□□ 0.68
Cdh4P39038 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.29■□□□□ 0.68
Cdh4P39038 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh4P39038 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh4P39038 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.29■□□□□ 0.68
Cdh4P39038 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.29■□□□□ 0.68
Cdh4P39038 Gm43530-201ENSMUST00000195920 274 ntBASIC19.29■□□□□ 0.68
Cdh4P39038 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh4P39038 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Cdh4P39038 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh4P39038 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh4P39038 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdh4P39038 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh4P39038 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh4P39038 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh4P39038 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh4P39038 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh4P39038 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.27■□□□□ 0.68
Cdh4P39038 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh4P39038 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh4P39038 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh4P39038 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh4P39038 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh4P39038 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh4P39038 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh4P39038 Gm21956-201ENSMUST00000179946 522 ntBASIC19.26■□□□□ 0.67
Cdh4P39038 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh4P39038 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdh4P39038 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh4P39038 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdh4P39038 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.25■□□□□ 0.67
Cdh4P39038 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh4P39038 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.24■□□□□ 0.67
Cdh4P39038 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdh4P39038 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.24■□□□□ 0.67
Cdh4P39038 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh4P39038 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cdh4P39038 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.23■□□□□ 0.67
Cdh4P39038 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh4P39038 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.23■□□□□ 0.67
Cdh4P39038 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh4P39038 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh4P39038 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh4P39038 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh4P39038 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh4P39038 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh4P39038 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh4P39038 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh4P39038 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh4P39038 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.22■□□□□ 0.67
Cdh4P39038 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms