Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.29■■□□□ 1.16
SYPP08247 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.29■■□□□ 1.16
SYPP08247 SLC6A10P-202ENST00000431994 2058 ntBASIC22.29■■□□□ 1.16
SYPP08247 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYPP08247 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.28■■□□□ 1.16
SYPP08247 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.28■■□□□ 1.16
SYPP08247 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SYPP08247 AC027612.3-201ENST00000413684 1047 ntBASIC22.28■■□□□ 1.16
SYPP08247 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.28■■□□□ 1.16
SYPP08247 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.28■■□□□ 1.16
SYPP08247 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYPP08247 AL161729.1-201ENST00000604104 1402 ntBASIC22.28■■□□□ 1.16
SYPP08247 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYPP08247 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SYPP08247 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.27■■□□□ 1.16
SYPP08247 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.27■■□□□ 1.16
SYPP08247 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SYPP08247 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYPP08247 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.27■■□□□ 1.16
SYPP08247 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.27■■□□□ 1.16
SYPP08247 DUX4L2-201ENST00000561772 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.27■■□□□ 1.16
SYPP08247 DUX4L6-201ENST00000626483 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 DUX4L1-201ENST00000627662 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 DUX4L8-201ENST00000629013 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 DUX4L3-201ENST00000630187 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 DUX4L7-201ENST00000630678 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 DUX4L5-201ENST00000630834 1275 ntBASIC22.27■■□□□ 1.16
SYPP08247 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.26■■□□□ 1.15
SYPP08247 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.26■■□□□ 1.15
SYPP08247 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
SYPP08247 AL031602.1-201ENST00000633169 911 ntBASIC22.26■■□□□ 1.15
SYPP08247 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SYPP08247 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.26■■□□□ 1.15
SYPP08247 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SYPP08247 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SYPP08247 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.26■■□□□ 1.15
SYPP08247 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SYPP08247 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYPP08247 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.25■■□□□ 1.15
SYPP08247 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
SYPP08247 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.25■■□□□ 1.15
SYPP08247 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.25■■□□□ 1.15
SYPP08247 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
SYPP08247 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.25■■□□□ 1.15
SYPP08247 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYPP08247 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.24■■□□□ 1.15
SYPP08247 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.24■■□□□ 1.15
SYPP08247 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYPP08247 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SYPP08247 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.24■■□□□ 1.15
SYPP08247 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SYPP08247 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SYPP08247 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.24■■□□□ 1.15
SYPP08247 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYPP08247 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SYPP08247 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SYPP08247 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.24■■□□□ 1.15
SYPP08247 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SYPP08247 AC141586.4-201ENST00000624558 1573 ntBASIC22.24■■□□□ 1.15
SYPP08247 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYPP08247 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.24■■□□□ 1.15
SYPP08247 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SYPP08247 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYPP08247 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYPP08247 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYPP08247 MIR572-201ENST00000384983 95 ntBASIC22.23■■□□□ 1.15
SYPP08247 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SYPP08247 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.23■■□□□ 1.15
SYPP08247 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.23■■□□□ 1.15
SYPP08247 IGHV3-19-201ENST00000521488 291 ntBASIC22.23■■□□□ 1.15
SYPP08247 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.23■■□□□ 1.15
SYPP08247 AL354811.1-201ENST00000610286 706 ntBASIC22.23■■□□□ 1.15
SYPP08247 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SYPP08247 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.23■■□□□ 1.15
SYPP08247 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYPP08247 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.22■■□□□ 1.15
SYPP08247 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYPP08247 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYPP08247 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.22■■□□□ 1.15
SYPP08247 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SYPP08247 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.22■■□□□ 1.15
SYPP08247 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.22■■□□□ 1.15
SYPP08247 AC004911.1-201ENST00000416316 871 ntBASIC22.22■■□□□ 1.15
SYPP08247 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYPP08247 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.22■■□□□ 1.15
SYPP08247 AC092437.1-201ENST00000624794 1048 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms