Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.76■□□□□ 0.59
CTSDP07339 MIR4449-201ENST00000578365 66 ntBASIC18.76■□□□□ 0.59
CTSDP07339 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTSDP07339 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTSDP07339 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CTSDP07339 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.76■□□□□ 0.59
CTSDP07339 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSDP07339 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.75■□□□□ 0.59
CTSDP07339 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSDP07339 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTSDP07339 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSDP07339 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTSDP07339 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CTSDP07339 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSDP07339 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSDP07339 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSDP07339 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTSDP07339 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSDP07339 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSDP07339 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.74■□□□□ 0.59
CTSDP07339 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.74■□□□□ 0.59
CTSDP07339 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.73■□□□□ 0.59
CTSDP07339 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 AL592295.1-201ENST00000400984 884 ntBASIC18.73■□□□□ 0.59
CTSDP07339 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.73■□□□□ 0.59
CTSDP07339 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTSDP07339 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSDP07339 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.72■□□□□ 0.59
CTSDP07339 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.72■□□□□ 0.59
CTSDP07339 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSDP07339 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.71■□□□□ 0.59
CTSDP07339 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CTSDP07339 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.71■□□□□ 0.59
CTSDP07339 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 ALDH1A3-203ENST00000557963 1670 ntBASIC18.71■□□□□ 0.59
CTSDP07339 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 RPS2P7-201ENST00000447334 885 ntBASIC18.71■□□□□ 0.59
CTSDP07339 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.71■□□□□ 0.59
CTSDP07339 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.71■□□□□ 0.59
CTSDP07339 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 PKD1P6-201ENST00000343738 4769 ntBASIC18.71■□□□□ 0.59
CTSDP07339 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTSDP07339 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CTSDP07339 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
CTSDP07339 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.7■□□□□ 0.58
CTSDP07339 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.7■□□□□ 0.58
CTSDP07339 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTSDP07339 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTSDP07339 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.7■□□□□ 0.58
CTSDP07339 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTSDP07339 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSDP07339 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CTSDP07339 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSDP07339 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSDP07339 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CTSDP07339 AC007375.3-201ENST00000600936 2314 ntBASIC18.68■□□□□ 0.58
CTSDP07339 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSDP07339 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSDP07339 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSDP07339 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSDP07339 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSDP07339 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSDP07339 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSDP07339 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms