Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Gm12922-201ENSMUST00000120626 809 ntBASIC16.86■□□□□ 0.29
Cd74P04441 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd74P04441 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd74P04441 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd74P04441 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd74P04441 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd74P04441 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd74P04441 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd74P04441 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd74P04441 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Cd74P04441 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cd74P04441 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd74P04441 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cd74P04441 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd74P04441 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
Cd74P04441 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cd74P04441 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.84■□□□□ 0.29
Cd74P04441 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.84■□□□□ 0.29
Cd74P04441 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd74P04441 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd74P04441 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd74P04441 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd74P04441 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd74P04441 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Cd74P04441 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd74P04441 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd74P04441 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd74P04441 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cd74P04441 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd74P04441 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.83■□□□□ 0.28
Cd74P04441 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd74P04441 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd74P04441 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd74P04441 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cd74P04441 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd74P04441 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd74P04441 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.82■□□□□ 0.28
Cd74P04441 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd74P04441 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cd74P04441 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cd74P04441 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.81■□□□□ 0.28
Cd74P04441 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd74P04441 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.8■□□□□ 0.28
Cd74P04441 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.8■□□□□ 0.28
Cd74P04441 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.8■□□□□ 0.28
Cd74P04441 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd74P04441 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd74P04441 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd74P04441 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd74P04441 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.79■□□□□ 0.28
Cd74P04441 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.79■□□□□ 0.28
Cd74P04441 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd74P04441 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd74P04441 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cd74P04441 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd74P04441 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.78■□□□□ 0.28
Cd74P04441 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd74P04441 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd74P04441 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd74P04441 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cd74P04441 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.77■□□□□ 0.28
Cd74P04441 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.77■□□□□ 0.28
Cd74P04441 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cd74P04441 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd74P04441 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.77■□□□□ 0.27
Cd74P04441 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cd74P04441 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms