Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 RPS2P35-201ENST00000443417 897 ntBASIC19.15■□□□□ 0.66
CD3DP04234 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.15■□□□□ 0.66
CD3DP04234 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CD3DP04234 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CD3DP04234 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD3DP04234 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD3DP04234 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD3DP04234 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD3DP04234 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CD3DP04234 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.14■□□□□ 0.65
CD3DP04234 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD3DP04234 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD3DP04234 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.14■□□□□ 0.65
CD3DP04234 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
CD3DP04234 MIR3648-2-201ENST00000581792 180 ntBASIC19.14■□□□□ 0.65
CD3DP04234 MIR3648-1-201ENST00000615959 180 ntBASIC19.14■□□□□ 0.65
CD3DP04234 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD3DP04234 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.14■□□□□ 0.65
CD3DP04234 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CD3DP04234 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CD3DP04234 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD3DP04234 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
CD3DP04234 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.13■□□□□ 0.65
CD3DP04234 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.13■□□□□ 0.65
CD3DP04234 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.13■□□□□ 0.65
CD3DP04234 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CD3DP04234 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.13■□□□□ 0.65
CD3DP04234 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CD3DP04234 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 ESRRAP2-201ENST00000418437 1549 ntBASIC19.13■□□□□ 0.65
CD3DP04234 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
CD3DP04234 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.13■□□□□ 0.65
CD3DP04234 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.13■□□□□ 0.65
CD3DP04234 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD3DP04234 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD3DP04234 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD3DP04234 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD3DP04234 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.12■□□□□ 0.65
CD3DP04234 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD3DP04234 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD3DP04234 AC090877.2-201ENST00000558441 1738 ntBASIC19.11■□□□□ 0.65
CD3DP04234 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.11■□□□□ 0.65
CD3DP04234 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD3DP04234 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.11■□□□□ 0.65
CD3DP04234 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.11■□□□□ 0.65
CD3DP04234 ECEL1P2-201ENST00000461596 1295 ntBASIC19.11■□□□□ 0.65
CD3DP04234 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD3DP04234 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.11■□□□□ 0.65
CD3DP04234 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD3DP04234 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CD3DP04234 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.11■□□□□ 0.65
CD3DP04234 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD3DP04234 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CD3DP04234 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
CD3DP04234 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD3DP04234 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CD3DP04234 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CD3DP04234 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.09■□□□□ 0.65
CD3DP04234 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CD3DP04234 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CD3DP04234 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD3DP04234 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD3DP04234 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD3DP04234 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CD3DP04234 AC016575.1-201ENST00000607026 382 ntBASIC19.08■□□□□ 0.64
CD3DP04234 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD3DP04234 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CD3DP04234 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD3DP04234 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms