Protein–RNA interactions for Protein: O60763

USO1, General vesicular transport factor p115, humanhuman

Known RBP Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USO1O60763 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 AC131281.2-201ENST00000520478 145 ntBASIC25.29■■□□□ 1.64
USO1O60763 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.29■■□□□ 1.64
USO1O60763 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.29■■□□□ 1.64
USO1O60763 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.29■■□□□ 1.64
USO1O60763 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.29■■□□□ 1.64
USO1O60763 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.28■■□□□ 1.64
USO1O60763 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.28■■□□□ 1.64
USO1O60763 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.28■■□□□ 1.64
USO1O60763 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
USO1O60763 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.27■■□□□ 1.64
USO1O60763 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.27■■□□□ 1.64
USO1O60763 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.27■■□□□ 1.64
USO1O60763 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 ABCB10P4-201ENST00000566803 2184 ntBASIC25.27■■□□□ 1.64
USO1O60763 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
USO1O60763 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
USO1O60763 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.26■■□□□ 1.63
USO1O60763 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
USO1O60763 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
USO1O60763 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 AL512631.2-201ENST00000604634 923 ntBASIC25.25■■□□□ 1.63
USO1O60763 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.25■■□□□ 1.63
USO1O60763 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
USO1O60763 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.24■■□□□ 1.63
USO1O60763 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
USO1O60763 AC008406.3-201ENST00000620001 1374 ntBASIC25.24■■□□□ 1.63
USO1O60763 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.24■■□□□ 1.63
USO1O60763 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.24■■□□□ 1.63
USO1O60763 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
USO1O60763 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
USO1O60763 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 MIR4466-201ENST00000606121 54 ntBASIC25.22■■□□□ 1.63
USO1O60763 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.22■■□□□ 1.63
USO1O60763 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
USO1O60763 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.21■■□□□ 1.63
USO1O60763 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.2■■□□□ 1.62
USO1O60763 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.2■■□□□ 1.62
USO1O60763 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms