Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.47■□□□□ 0.39
Dkk1O54908 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Dkk1O54908 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dkk1O54908 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.46■□□□□ 0.39
Dkk1O54908 Gm45696-201ENSMUST00000212088 985 ntBASIC17.46■□□□□ 0.39
Dkk1O54908 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Dkk1O54908 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Dkk1O54908 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.46■□□□□ 0.39
Dkk1O54908 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dkk1O54908 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dkk1O54908 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Dkk1O54908 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dkk1O54908 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dkk1O54908 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dkk1O54908 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC17.45■□□□□ 0.38
Dkk1O54908 Golgb1-201ENSMUST00000023534 498 ntBASIC17.45■□□□□ 0.38
Dkk1O54908 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.45■□□□□ 0.38
Dkk1O54908 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.45■□□□□ 0.38
Dkk1O54908 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dkk1O54908 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dkk1O54908 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.44■□□□□ 0.38
Dkk1O54908 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.44■□□□□ 0.38
Dkk1O54908 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Dkk1O54908 Gm43530-201ENSMUST00000195920 274 ntBASIC17.44■□□□□ 0.38
Dkk1O54908 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Dkk1O54908 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Dkk1O54908 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Dkk1O54908 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Dkk1O54908 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Gm13263-201ENSMUST00000121271 838 ntBASIC17.43■□□□□ 0.38
Dkk1O54908 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.43■□□□□ 0.38
Dkk1O54908 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Dkk1O54908 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Dkk1O54908 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Dkk1O54908 Gm43377-201ENSMUST00000201640 455 ntBASIC17.42■□□□□ 0.38
Dkk1O54908 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dkk1O54908 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.41■□□□□ 0.38
Dkk1O54908 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.41■□□□□ 0.38
Dkk1O54908 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC17.41■□□□□ 0.38
Dkk1O54908 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.41■□□□□ 0.38
Dkk1O54908 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.41■□□□□ 0.38
Dkk1O54908 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Dkk1O54908 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.41■□□□□ 0.38
Dkk1O54908 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dkk1O54908 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Dkk1O54908 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dkk1O54908 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dkk1O54908 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dkk1O54908 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dkk1O54908 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms