Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ChkaO54804 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.45■□□□□ 0.86
ChkaO54804 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ChkaO54804 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ChkaO54804 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ChkaO54804 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.44■□□□□ 0.86
ChkaO54804 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ChkaO54804 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ChkaO54804 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ChkaO54804 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ChkaO54804 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ChkaO54804 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.43■□□□□ 0.86
ChkaO54804 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.43■□□□□ 0.86
ChkaO54804 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ChkaO54804 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ChkaO54804 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ChkaO54804 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.42■□□□□ 0.86
ChkaO54804 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ChkaO54804 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.42■□□□□ 0.86
ChkaO54804 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ChkaO54804 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ChkaO54804 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ChkaO54804 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ChkaO54804 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ChkaO54804 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ChkaO54804 Golph3-202ENSMUST00000226517 2359 ntBASIC20.41■□□□□ 0.86
ChkaO54804 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.41■□□□□ 0.86
ChkaO54804 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.41■□□□□ 0.86
ChkaO54804 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ChkaO54804 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ChkaO54804 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
ChkaO54804 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ChkaO54804 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ChkaO54804 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.39■□□□□ 0.86
ChkaO54804 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ChkaO54804 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ChkaO54804 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ChkaO54804 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ChkaO54804 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.39■□□□□ 0.85
ChkaO54804 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ChkaO54804 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ChkaO54804 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ChkaO54804 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ChkaO54804 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ChkaO54804 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ChkaO54804 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ChkaO54804 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ChkaO54804 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ChkaO54804 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ChkaO54804 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ChkaO54804 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ChkaO54804 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ChkaO54804 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ChkaO54804 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ChkaO54804 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ChkaO54804 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ChkaO54804 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.36■□□□□ 0.85
ChkaO54804 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ChkaO54804 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.36■□□□□ 0.85
ChkaO54804 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.36■□□□□ 0.85
ChkaO54804 Gm40881-201ENSMUST00000223397 166 ntBASIC20.36■□□□□ 0.85
ChkaO54804 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ChkaO54804 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ChkaO54804 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ChkaO54804 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms