Protein–RNA interactions for Protein: O08856

Ell, RNA polymerase II elongation factor ELL, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EllO08856 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EllO08856 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EllO08856 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EllO08856 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
EllO08856 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Gm15039-201ENSMUST00000118914 875 ntBASIC19.3■□□□□ 0.68
EllO08856 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Mir6236-201ENSMUST00000184437 123 ntBASIC19.3■□□□□ 0.68
EllO08856 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.3■□□□□ 0.68
EllO08856 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EllO08856 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.29■□□□□ 0.68
EllO08856 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.29■□□□□ 0.68
EllO08856 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.29■□□□□ 0.68
EllO08856 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EllO08856 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Gm13241-201ENSMUST00000094493 780 ntBASIC19.28■□□□□ 0.68
EllO08856 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EllO08856 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
EllO08856 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
EllO08856 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.27■□□□□ 0.68
EllO08856 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EllO08856 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EllO08856 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.26■□□□□ 0.67
EllO08856 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EllO08856 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EllO08856 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EllO08856 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.25■□□□□ 0.67
EllO08856 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EllO08856 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EllO08856 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EllO08856 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.24■□□□□ 0.67
EllO08856 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EllO08856 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EllO08856 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EllO08856 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.23■□□□□ 0.67
EllO08856 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.23■□□□□ 0.67
EllO08856 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EllO08856 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.22■□□□□ 0.67
EllO08856 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.22■□□□□ 0.67
EllO08856 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EllO08856 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EllO08856 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EllO08856 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EllO08856 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EllO08856 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EllO08856 Gm21956-201ENSMUST00000179946 522 ntBASIC19.21■□□□□ 0.67
EllO08856 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.21■□□□□ 0.67
EllO08856 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EllO08856 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EllO08856 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EllO08856 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EllO08856 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
EllO08856 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.2■□□□□ 0.66
EllO08856 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
EllO08856 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EllO08856 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EllO08856 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
EllO08856 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
EllO08856 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EllO08856 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EllO08856 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EllO08856 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EllO08856 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EllO08856 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms