Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Gm7332-201ENSMUST00000118351 454 ntBASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa8J3QNX5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.41■□□□□ 0.54
Shisa8J3QNX5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa8J3QNX5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa8J3QNX5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa8J3QNX5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa8J3QNX5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shisa8J3QNX5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shisa8J3QNX5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shisa8J3QNX5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shisa8J3QNX5 Gm11175-201ENSMUST00000116172 543 ntBASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Shisa8J3QNX5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Shisa8J3QNX5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa8J3QNX5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa8J3QNX5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa8J3QNX5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa8J3QNX5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa8J3QNX5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa8J3QNX5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa8J3QNX5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Shisa8J3QNX5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Shisa8J3QNX5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa8J3QNX5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa8J3QNX5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa8J3QNX5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa8J3QNX5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Shisa8J3QNX5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa8J3QNX5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa8J3QNX5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa8J3QNX5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms