Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc141E9Q8Q6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc141E9Q8Q6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC31.12■■■□□ 2.57
Ccdc141E9Q8Q6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc141E9Q8Q6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc141E9Q8Q6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC31.12■■■□□ 2.57
Ccdc141E9Q8Q6 Gm10602-201ENSMUST00000098239 609 ntBASIC31.12■■■□□ 2.57
Ccdc141E9Q8Q6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc141E9Q8Q6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc141E9Q8Q6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc141E9Q8Q6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc141E9Q8Q6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc141E9Q8Q6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC31.1■■■□□ 2.57
Ccdc141E9Q8Q6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc141E9Q8Q6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc141E9Q8Q6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc141E9Q8Q6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc141E9Q8Q6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC31.09■■■□□ 2.57
Ccdc141E9Q8Q6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Ccdc141E9Q8Q6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc141E9Q8Q6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc141E9Q8Q6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc141E9Q8Q6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc141E9Q8Q6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC31.08■■■□□ 2.57
Ccdc141E9Q8Q6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
Ccdc141E9Q8Q6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc141E9Q8Q6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Ccdc141E9Q8Q6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc141E9Q8Q6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc141E9Q8Q6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc141E9Q8Q6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc141E9Q8Q6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc141E9Q8Q6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc141E9Q8Q6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc141E9Q8Q6 Gm13234-201ENSMUST00000120010 747 ntBASIC31.06■■■□□ 2.56
Ccdc141E9Q8Q6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc141E9Q8Q6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc141E9Q8Q6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc141E9Q8Q6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC31.05■■■□□ 2.56
Ccdc141E9Q8Q6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC31.05■■■□□ 2.56
Ccdc141E9Q8Q6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC31.05■■■□□ 2.56
Ccdc141E9Q8Q6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc141E9Q8Q6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc141E9Q8Q6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC31.04■■■□□ 2.56
Ccdc141E9Q8Q6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc141E9Q8Q6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc141E9Q8Q6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc141E9Q8Q6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Ap3s1-204ENSMUST00000225520 957 ntBASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Reep4-203ENSMUST00000226563 1444 ntBASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Gm9988-201ENSMUST00000069786 435 ntBASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc141E9Q8Q6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc141E9Q8Q6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC31.02■■■□□ 2.56
Ccdc141E9Q8Q6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC31.02■■■□□ 2.56
Ccdc141E9Q8Q6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc141E9Q8Q6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc141E9Q8Q6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc141E9Q8Q6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc141E9Q8Q6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ccdc141E9Q8Q6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Ccdc141E9Q8Q6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc141E9Q8Q6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ccdc141E9Q8Q6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Ccdc141E9Q8Q6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ccdc141E9Q8Q6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc141E9Q8Q6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc141E9Q8Q6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Gm27801-201ENSMUST00000184174 223 ntBASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc141E9Q8Q6 Il17rd-202ENSMUST00000223942 2186 ntBASIC30.97■■■□□ 2.55
Ccdc141E9Q8Q6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc141E9Q8Q6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc141E9Q8Q6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc141E9Q8Q6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc141E9Q8Q6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC30.94■■■□□ 2.54
Ccdc141E9Q8Q6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc141E9Q8Q6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc141E9Q8Q6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc141E9Q8Q6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms