Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
4933424G06RikA0A140LIP3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
4933424G06RikA0A140LIP3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
4933424G06RikA0A140LIP3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
4933424G06RikA0A140LIP3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
4933424G06RikA0A140LIP3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
4933424G06RikA0A140LIP3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
4933424G06RikA0A140LIP3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
4933424G06RikA0A140LIP3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
4933424G06RikA0A140LIP3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
4933424G06RikA0A140LIP3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.64■□□□□ 0.89
4933424G06RikA0A140LIP3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
4933424G06RikA0A140LIP3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
4933424G06RikA0A140LIP3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
4933424G06RikA0A140LIP3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
4933424G06RikA0A140LIP3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
4933424G06RikA0A140LIP3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
4933424G06RikA0A140LIP3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
4933424G06RikA0A140LIP3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms