Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10232-201ENSMUST00000089221 720 ntBASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-2-dv6d-2A0A0G2JGQ7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7143-201ENSMUST00000222811 859 ntBASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms