Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 AC027682.1-201ENST00000562846 899 ntBASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.24■■□□□ 1.15
CSNK1G3Q9Y6M4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.23■■□□□ 1.15
CSNK1G3Q9Y6M4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 CA15P2-201ENST00000611168 834 ntBASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CSNK1G3Q9Y6M4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 AC136469.2-201ENST00000623944 1028 ntBASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CSNK1G3Q9Y6M4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CSNK1G3Q9Y6M4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
CSNK1G3Q9Y6M4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CSNK1G3Q9Y6M4 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 HLA-L-211ENST00000482052 1765 ntBASIC22.2■■□□□ 1.14
CSNK1G3Q9Y6M4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 MIR5787-201ENST00000611784 55 ntBASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.19■■□□□ 1.14
CSNK1G3Q9Y6M4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CSNK1G3Q9Y6M4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.18■■□□□ 1.14
CSNK1G3Q9Y6M4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CSNK1G3Q9Y6M4 AC009086.3-201ENST00000623486 1008 ntBASIC22.18■■□□□ 1.14
CSNK1G3Q9Y6M4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.18■■□□□ 1.14
CSNK1G3Q9Y6M4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CSNK1G3Q9Y6M4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G3Q9Y6M4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 AC008764.7-201ENST00000593779 1081 ntBASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G3Q9Y6M4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 ALDH1A3-203ENST00000557963 1670 ntBASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 MIR3181-201ENST00000578512 73 ntBASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms