Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARFGEF1Q9Y6D6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.16■■■□□ 2.1
ARFGEF1Q9Y6D6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.16■■■□□ 2.1
ARFGEF1Q9Y6D6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARFGEF1Q9Y6D6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARFGEF1Q9Y6D6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.16■■■□□ 2.1
ARFGEF1Q9Y6D6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 AC104771.1-201ENST00000603335 964 ntBASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 AC073111.5-205ENST00000641717 521 ntBASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARFGEF1Q9Y6D6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ARFGEF1Q9Y6D6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARFGEF1Q9Y6D6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
ARFGEF1Q9Y6D6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ARFGEF1Q9Y6D6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.14■■■□□ 2.1
ARFGEF1Q9Y6D6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
ARFGEF1Q9Y6D6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
ARFGEF1Q9Y6D6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ARFGEF1Q9Y6D6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
ARFGEF1Q9Y6D6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.14■■■□□ 2.09
ARFGEF1Q9Y6D6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
ARFGEF1Q9Y6D6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 AC016769.1-201ENST00000409132 1010 ntBASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 NTF6G-201ENST00000591094 616 ntBASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARFGEF1Q9Y6D6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ARFGEF1Q9Y6D6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 KRT18P61-201ENST00000585825 1298 ntBASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 AC006015.1-201ENST00000429970 570 ntBASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.11■■■□□ 2.09
ARFGEF1Q9Y6D6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ARFGEF1Q9Y6D6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.09■■■□□ 2.09
ARFGEF1Q9Y6D6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ARFGEF1Q9Y6D6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
ARFGEF1Q9Y6D6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ARFGEF1Q9Y6D6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.08■■■□□ 2.09
ARFGEF1Q9Y6D6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
ARFGEF1Q9Y6D6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.08■■■□□ 2.09
ARFGEF1Q9Y6D6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.07■■■□□ 2.08
ARFGEF1Q9Y6D6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ARFGEF1Q9Y6D6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARFGEF1Q9Y6D6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARFGEF1Q9Y6D6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 CDCA4P2-201ENST00000441182 718 ntBASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC28.06■■■□□ 2.08
ARFGEF1Q9Y6D6 pRNA.6-201ENST00000610482 90 ntBASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms