Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 AC005703.6-201ENST00000623265 1329 ntBASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC3Q9UN70 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 AC010997.5-201ENST00000609182 354 ntBASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 ANOS2P-203ENST00000472227 1816 ntBASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGC3Q9UN70 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 UNC93B8-201ENST00000511903 705 ntBASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 AC092068.2-201ENST00000590491 1708 ntBASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGC3Q9UN70 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TSPY9P-201ENST00000440215 945 ntBASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TSPY11P-201ENST00000442607 1045 ntBASIC24■■□□□ 1.43
PCDHGC3Q9UN70 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PCDHGC3Q9UN70 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 GUSBP5-201ENST00000418136 578 ntBASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGC3Q9UN70 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHGC3Q9UN70 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGC3Q9UN70 DUSP8P5-201ENST00000422884 1815 ntBASIC23.97■■□□□ 1.43
PCDHGC3Q9UN70 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.97■■□□□ 1.43
PCDHGC3Q9UN70 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHGC3Q9UN70 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHGC3Q9UN70 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PCDHGC3Q9UN70 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PCDHGC3Q9UN70 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHGC3Q9UN70 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGC3Q9UN70 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms