Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh2d3cQ9QZS8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sh2d3cQ9QZS8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh2d3cQ9QZS8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh2d3cQ9QZS8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh2d3cQ9QZS8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh2d3cQ9QZS8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh2d3cQ9QZS8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.64■□□□□ 0.74
Sh2d3cQ9QZS8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Sh2d3cQ9QZS8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d3cQ9QZS8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sh2d3cQ9QZS8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d3cQ9QZS8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d3cQ9QZS8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh2d3cQ9QZS8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Gm10420-201ENSMUST00000121713 882 ntBASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sh2d3cQ9QZS8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh2d3cQ9QZS8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms