Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf2ird2Q99NI3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf2ird2Q99NI3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Gtf2ird2Q99NI3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf2ird2Q99NI3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf2ird2Q99NI3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf2ird2Q99NI3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf2ird2Q99NI3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf2ird2Q99NI3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf2ird2Q99NI3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf2ird2Q99NI3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Gtf2ird2Q99NI3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf2ird2Q99NI3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.8■□□□□ 0.92
Gtf2ird2Q99NI3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Gtf2ird2Q99NI3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms