Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Tpgs1Q99MS8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tpgs1Q99MS8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tpgs1Q99MS8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.3■■□□□ 1
Tpgs1Q99MS8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tpgs1Q99MS8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tpgs1Q99MS8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tpgs1Q99MS8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tpgs1Q99MS8 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.29■■□□□ 1
Tpgs1Q99MS8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.29■■□□□ 1
Tpgs1Q99MS8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.29■■□□□ 1
Tpgs1Q99MS8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Tpgs1Q99MS8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tpgs1Q99MS8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tpgs1Q99MS8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tpgs1Q99MS8 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.27■■□□□ 1
Tpgs1Q99MS8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tpgs1Q99MS8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tpgs1Q99MS8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.27■■□□□ 1
Tpgs1Q99MS8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tpgs1Q99MS8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tpgs1Q99MS8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tpgs1Q99MS8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tpgs1Q99MS8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.26■□□□□ 0.99
Tpgs1Q99MS8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tpgs1Q99MS8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tpgs1Q99MS8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tpgs1Q99MS8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tpgs1Q99MS8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tpgs1Q99MS8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tpgs1Q99MS8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tpgs1Q99MS8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tpgs1Q99MS8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Gm21956-201ENSMUST00000179946 522 ntBASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Tpgs1Q99MS8 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.23■□□□□ 0.99
Tpgs1Q99MS8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tpgs1Q99MS8 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.23■□□□□ 0.99
Tpgs1Q99MS8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tpgs1Q99MS8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tpgs1Q99MS8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpgs1Q99MS8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tpgs1Q99MS8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Mir6236-201ENSMUST00000184437 123 ntBASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpgs1Q99MS8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpgs1Q99MS8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.19■□□□□ 0.98
Tpgs1Q99MS8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpgs1Q99MS8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpgs1Q99MS8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tpgs1Q99MS8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tpgs1Q99MS8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpgs1Q99MS8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpgs1Q99MS8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpgs1Q99MS8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms