Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56Q96MV1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.64■□□□□ 0.58
TMEM56Q96MV1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TMEM56Q96MV1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
TMEM56Q96MV1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM56Q96MV1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 AC137767.1-201ENST00000602918 1920 ntBASIC18.63■□□□□ 0.57
TMEM56Q96MV1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
TMEM56Q96MV1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 AC133552.2-201ENST00000619106 1032 ntBASIC18.62■□□□□ 0.57
TMEM56Q96MV1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56Q96MV1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM56Q96MV1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56Q96MV1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 RNF126P1-201ENST00000567452 1320 ntBASIC18.59■□□□□ 0.57
TMEM56Q96MV1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.59■□□□□ 0.57
TMEM56Q96MV1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56Q96MV1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56Q96MV1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM56Q96MV1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56Q96MV1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56Q96MV1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56Q96MV1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM56Q96MV1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 AC009831.1-201ENST00000580420 1582 ntBASIC18.58■□□□□ 0.56
TMEM56Q96MV1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56Q96MV1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms