Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lims2Q91XD2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.02■□□□□ 0.96
Lims2Q91XD2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lims2Q91XD2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Lims2Q91XD2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lims2Q91XD2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lims2Q91XD2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.01■□□□□ 0.95
Lims2Q91XD2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lims2Q91XD2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lims2Q91XD2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lims2Q91XD2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lims2Q91XD2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lims2Q91XD2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lims2Q91XD2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Lims2Q91XD2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lims2Q91XD2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lims2Q91XD2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lims2Q91XD2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.97■□□□□ 0.95
Lims2Q91XD2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.97■□□□□ 0.95
Lims2Q91XD2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lims2Q91XD2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lims2Q91XD2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.95■□□□□ 0.95
Lims2Q91XD2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lims2Q91XD2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lims2Q91XD2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lims2Q91XD2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lims2Q91XD2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lims2Q91XD2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lims2Q91XD2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.95■□□□□ 0.94
Lims2Q91XD2 Gm43137-201ENSMUST00000198052 594 ntBASIC20.95■□□□□ 0.94
Lims2Q91XD2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lims2Q91XD2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Lims2Q91XD2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Lims2Q91XD2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lims2Q91XD2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lims2Q91XD2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Lims2Q91XD2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lims2Q91XD2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.93■□□□□ 0.94
Lims2Q91XD2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lims2Q91XD2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lims2Q91XD2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Lims2Q91XD2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lims2Q91XD2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.92■□□□□ 0.94
Lims2Q91XD2 Gm45417-201ENSMUST00000209533 758 ntBASIC20.92■□□□□ 0.94
Lims2Q91XD2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lims2Q91XD2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lims2Q91XD2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lims2Q91XD2 Mir6236-201ENSMUST00000184437 123 ntBASIC20.91■□□□□ 0.94
Lims2Q91XD2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lims2Q91XD2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lims2Q91XD2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.91■□□□□ 0.94
Lims2Q91XD2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms