Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.7■□□□□ 0.74
Q8VDP2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q8VDP2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Q8VDP2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q8VDP2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.69■□□□□ 0.74
Q8VDP2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q8VDP2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q8VDP2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q8VDP2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q8VDP2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Q8VDP2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Q8VDP2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.67■□□□□ 0.74
Q8VDP2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q8VDP2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Q8VDP2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Q8VDP2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Q8VDP2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q8VDP2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Q8VDP2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
Q8VDP2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.65■□□□□ 0.74
Q8VDP2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Q8VDP2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Q8VDP2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q8VDP2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Q8VDP2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Q8VDP2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Q8VDP2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Q8VDP2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q8VDP2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q8VDP2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q8VDP2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q8VDP2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q8VDP2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Q8VDP2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.62■□□□□ 0.73
Q8VDP2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.62■□□□□ 0.73
Q8VDP2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.62■□□□□ 0.73
Q8VDP2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.62■□□□□ 0.73
Q8VDP2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.62■□□□□ 0.73
Q8VDP2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Q8VDP2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms