Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afjQ8R1M2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Gm45444-201ENSMUST00000211394 898 ntBASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afjQ8R1M2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afjQ8R1M2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
H2afjQ8R1M2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afjQ8R1M2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afjQ8R1M2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afjQ8R1M2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Gm5921-201ENSMUST00000075898 882 ntBASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afjQ8R1M2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afjQ8R1M2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afjQ8R1M2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afjQ8R1M2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afjQ8R1M2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms