Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIMC1Q8NDZ2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.31■■□□□ 1
SIMC1Q8NDZ2 AC092028.1-203ENST00000608262 953 ntBASIC21.31■■□□□ 1
SIMC1Q8NDZ2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SIMC1Q8NDZ2 ALDH1A3-203ENST00000557963 1670 ntBASIC21.31■■□□□ 1
SIMC1Q8NDZ2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 KRT125P-201ENST00000546827 989 ntBASIC21.3■■□□□ 1
SIMC1Q8NDZ2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SIMC1Q8NDZ2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.29■■□□□ 1
SIMC1Q8NDZ2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SIMC1Q8NDZ2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIMC1Q8NDZ2 AC068473.5-201ENST00000616428 2072 ntBASIC21.27■■□□□ 1
SIMC1Q8NDZ2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIMC1Q8NDZ2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SIMC1Q8NDZ2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SIMC1Q8NDZ2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.27■□□□□ 0.99
SIMC1Q8NDZ2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SIMC1Q8NDZ2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 TSPY9P-201ENST00000440215 945 ntBASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 TSPY11P-201ENST00000442607 1045 ntBASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 UNC93B8-201ENST00000511903 705 ntBASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms