Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Gm14523-201ENSMUST00000117260 558 ntBASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Gm27502-201ENSMUST00000183495 199 ntBASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lysmd4Q8CC84 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.24■□□□□ 0.51
Lysmd4Q8CC84 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lysmd4Q8CC84 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Gm7332-201ENSMUST00000118351 454 ntBASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lysmd4Q8CC84 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Gm11175-201ENSMUST00000116172 543 ntBASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lysmd4Q8CC84 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lysmd4Q8CC84 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lysmd4Q8CC84 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Mir6538-201ENSMUST00000183713 110 ntBASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lysmd4Q8CC84 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms