Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11541Q8C4D8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm11541Q8C4D8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Gm11541Q8C4D8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11541Q8C4D8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11541Q8C4D8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Gm14117-201ENSMUST00000122417 843 ntBASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Gm7417-201ENSMUST00000192950 473 ntBASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm11541Q8C4D8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11541Q8C4D8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm11541Q8C4D8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm11541Q8C4D8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm11541Q8C4D8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gm11541Q8C4D8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm11541Q8C4D8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm11541Q8C4D8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms