Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sh3rf3Q8C120 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf3Q8C120 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf3Q8C120 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Sh3rf3Q8C120 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3rf3Q8C120 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3rf3Q8C120 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3rf3Q8C120 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3rf3Q8C120 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3rf3Q8C120 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3rf3Q8C120 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf3Q8C120 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Gm45102-201ENSMUST00000207427 857 ntBASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Sh3rf3Q8C120 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf3Q8C120 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Rps24-207ENSMUST00000224568 714 ntBASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf3Q8C120 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf3Q8C120 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf3Q8C120 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3rf3Q8C120 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.08■□□□□ 0.96
Sh3rf3Q8C120 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms