Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4Q8BQZ5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4Q8BQZ5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4Q8BQZ5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4Q8BQZ5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4Q8BQZ5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.58■□□□□ 0.73
Cpsf4Q8BQZ5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf4Q8BQZ5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf4Q8BQZ5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf4Q8BQZ5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.58■□□□□ 0.72
Cpsf4Q8BQZ5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.58■□□□□ 0.72
Cpsf4Q8BQZ5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf4Q8BQZ5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Cpsf4Q8BQZ5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
Cpsf4Q8BQZ5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf4Q8BQZ5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf4Q8BQZ5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf4Q8BQZ5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.57■□□□□ 0.72
Cpsf4Q8BQZ5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf4Q8BQZ5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cpsf4Q8BQZ5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Gm22238-201ENSMUST00000175222 88 ntBASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4Q8BQZ5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4Q8BQZ5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 196.6 ms