Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VmacQ8BP01 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VmacQ8BP01 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.54■■□□□ 1.36
VmacQ8BP01 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VmacQ8BP01 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
VmacQ8BP01 Gm12922-201ENSMUST00000120626 809 ntBASIC23.53■■□□□ 1.36
VmacQ8BP01 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.53■■□□□ 1.36
VmacQ8BP01 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.53■■□□□ 1.36
VmacQ8BP01 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
VmacQ8BP01 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
VmacQ8BP01 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VmacQ8BP01 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
VmacQ8BP01 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VmacQ8BP01 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VmacQ8BP01 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.52■■□□□ 1.36
VmacQ8BP01 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VmacQ8BP01 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VmacQ8BP01 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
VmacQ8BP01 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VmacQ8BP01 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VmacQ8BP01 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
VmacQ8BP01 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VmacQ8BP01 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
VmacQ8BP01 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VmacQ8BP01 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VmacQ8BP01 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VmacQ8BP01 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VmacQ8BP01 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
VmacQ8BP01 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.5■■□□□ 1.35
VmacQ8BP01 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.5■■□□□ 1.35
VmacQ8BP01 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VmacQ8BP01 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.49■■□□□ 1.35
VmacQ8BP01 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
VmacQ8BP01 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
VmacQ8BP01 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VmacQ8BP01 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VmacQ8BP01 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VmacQ8BP01 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
VmacQ8BP01 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.47■■□□□ 1.35
VmacQ8BP01 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
VmacQ8BP01 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.47■■□□□ 1.35
VmacQ8BP01 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.47■■□□□ 1.35
VmacQ8BP01 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.47■■□□□ 1.35
VmacQ8BP01 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VmacQ8BP01 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VmacQ8BP01 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VmacQ8BP01 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VmacQ8BP01 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
VmacQ8BP01 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
VmacQ8BP01 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VmacQ8BP01 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
VmacQ8BP01 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.45■■□□□ 1.35
VmacQ8BP01 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
VmacQ8BP01 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VmacQ8BP01 Golgb1-201ENSMUST00000023534 498 ntBASIC23.45■■□□□ 1.34
VmacQ8BP01 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.44■■□□□ 1.34
VmacQ8BP01 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
VmacQ8BP01 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VmacQ8BP01 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VmacQ8BP01 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VmacQ8BP01 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.43■■□□□ 1.34
VmacQ8BP01 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VmacQ8BP01 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VmacQ8BP01 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VmacQ8BP01 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VmacQ8BP01 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.42■■□□□ 1.34
VmacQ8BP01 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
VmacQ8BP01 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VmacQ8BP01 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VmacQ8BP01 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VmacQ8BP01 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VmacQ8BP01 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
VmacQ8BP01 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VmacQ8BP01 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
VmacQ8BP01 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
VmacQ8BP01 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VmacQ8BP01 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.41■■□□□ 1.34
VmacQ8BP01 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
VmacQ8BP01 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VmacQ8BP01 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms