Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Rpap1Q80TE0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC32.13■■■□□ 2.73
Rpap1Q80TE0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
Rpap1Q80TE0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Rpap1Q80TE0 Gm27045-201ENSMUST00000182145 1402 ntBASIC32.13■■■□□ 2.73
Rpap1Q80TE0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Rpap1Q80TE0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Rpap1Q80TE0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Rpap1Q80TE0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Rpap1Q80TE0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC32.12■■■□□ 2.73
Rpap1Q80TE0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Rpap1Q80TE0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rpap1Q80TE0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Rpap1Q80TE0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rpap1Q80TE0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC32.1■■■□□ 2.73
Rpap1Q80TE0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rpap1Q80TE0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
Rpap1Q80TE0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Rpap1Q80TE0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Rpap1Q80TE0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Rpap1Q80TE0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Rpap1Q80TE0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Rpap1Q80TE0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rpap1Q80TE0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC32.08■■■□□ 2.73
Rpap1Q80TE0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rpap1Q80TE0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Rpap1Q80TE0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC32.07■■■□□ 2.72
Rpap1Q80TE0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC32.07■■■□□ 2.72
Rpap1Q80TE0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Rpap1Q80TE0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Rpap1Q80TE0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Rpap1Q80TE0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rpap1Q80TE0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rpap1Q80TE0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rpap1Q80TE0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
Rpap1Q80TE0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Rpap1Q80TE0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rpap1Q80TE0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rpap1Q80TE0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Rpap1Q80TE0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rpap1Q80TE0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rpap1Q80TE0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rpap1Q80TE0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Rpap1Q80TE0 Gm12669-201ENSMUST00000122162 1009 ntBASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
Rpap1Q80TE0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
Rpap1Q80TE0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Rpap1Q80TE0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC32.01■■■□□ 2.72
Rpap1Q80TE0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Rpap1Q80TE0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Rpap1Q80TE0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Rpap1Q80TE0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Rpap1Q80TE0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Rpap1Q80TE0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC32■■■□□ 2.71
Rpap1Q80TE0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
Rpap1Q80TE0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Rpap1Q80TE0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC31.99■■■□□ 2.71
Rpap1Q80TE0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
Rpap1Q80TE0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Rpap1Q80TE0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Rpap1Q80TE0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Rpap1Q80TE0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rpap1Q80TE0 Gm11421-201ENSMUST00000122124 294 ntBASIC31.97■■■□□ 2.71
Rpap1Q80TE0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Rpap1Q80TE0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Rpap1Q80TE0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC31.97■■■□□ 2.71
Rpap1Q80TE0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Rpap1Q80TE0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Rpap1Q80TE0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms