Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Rtl1Q7M732 Gm6139-201ENSMUST00000079261 882 ntBASIC36.79■■■■□ 3.48
Rtl1Q7M732 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Rtl1Q7M732 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Rtl1Q7M732 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC36.77■■■■□ 3.48
Rtl1Q7M732 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC36.77■■■■□ 3.48
Rtl1Q7M732 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
Rtl1Q7M732 Gm5576-201ENSMUST00000075809 1236 ntBASIC36.76■■■■□ 3.48
Rtl1Q7M732 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC36.76■■■■□ 3.48
Rtl1Q7M732 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
Rtl1Q7M732 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC36.76■■■■□ 3.47
Rtl1Q7M732 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC36.76■■■■□ 3.47
Rtl1Q7M732 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
Rtl1Q7M732 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC36.75■■■■□ 3.47
Rtl1Q7M732 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Rtl1Q7M732 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Rtl1Q7M732 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Rtl1Q7M732 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC36.74■■■■□ 3.47
Rtl1Q7M732 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Rtl1Q7M732 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC36.73■■■■□ 3.47
Rtl1Q7M732 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC36.73■■■■□ 3.47
Rtl1Q7M732 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Rtl1Q7M732 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC36.72■■■■□ 3.47
Rtl1Q7M732 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
Rtl1Q7M732 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC36.71■■■■□ 3.47
Rtl1Q7M732 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC36.71■■■■□ 3.47
Rtl1Q7M732 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC36.71■■■■□ 3.47
Rtl1Q7M732 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
Rtl1Q7M732 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC36.71■■■■□ 3.47
Rtl1Q7M732 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
Rtl1Q7M732 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.7■■■■□ 3.47
Rtl1Q7M732 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.46
Rtl1Q7M732 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Rtl1Q7M732 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC36.69■■■■□ 3.46
Rtl1Q7M732 AC122428.2-201ENSMUST00000216321 1832 ntBASIC36.68■■■■□ 3.46
Rtl1Q7M732 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Rtl1Q7M732 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
Rtl1Q7M732 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC36.68■■■■□ 3.46
Rtl1Q7M732 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC36.68■■■■□ 3.46
Rtl1Q7M732 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC36.68■■■■□ 3.46
Rtl1Q7M732 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC36.68■■■■□ 3.46
Rtl1Q7M732 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
Rtl1Q7M732 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC36.67■■■■□ 3.46
Rtl1Q7M732 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Rtl1Q7M732 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC36.67■■■■□ 3.46
Rtl1Q7M732 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Rtl1Q7M732 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC36.66■■■■□ 3.46
Rtl1Q7M732 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
Rtl1Q7M732 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC36.66■■■■□ 3.46
Rtl1Q7M732 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC36.66■■■■□ 3.46
Rtl1Q7M732 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
Rtl1Q7M732 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
Rtl1Q7M732 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Rtl1Q7M732 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Rtl1Q7M732 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Rtl1Q7M732 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC36.65■■■■□ 3.46
Rtl1Q7M732 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
Rtl1Q7M732 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Rtl1Q7M732 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Rtl1Q7M732 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Rtl1Q7M732 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Rtl1Q7M732 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC36.64■■■■□ 3.46
Rtl1Q7M732 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC36.64■■■■□ 3.46
Rtl1Q7M732 Gm7160-202ENSMUST00000188519 1027 ntBASIC36.64■■■■□ 3.46
Rtl1Q7M732 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
Rtl1Q7M732 AC166356.1-201ENSMUST00000228236 1426 ntBASIC36.63■■■■□ 3.45
Rtl1Q7M732 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
Rtl1Q7M732 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC36.63■■■■□ 3.45
Rtl1Q7M732 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC36.62■■■■□ 3.45
Rtl1Q7M732 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC36.62■■■■□ 3.45
Rtl1Q7M732 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Rtl1Q7M732 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC36.62■■■■□ 3.45
Rtl1Q7M732 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC36.62■■■■□ 3.45
Rtl1Q7M732 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Rtl1Q7M732 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
Rtl1Q7M732 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Rtl1Q7M732 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC36.61■■■■□ 3.45
Rtl1Q7M732 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Rtl1Q7M732 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
Rtl1Q7M732 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
Rtl1Q7M732 Mir7075-201ENSMUST00000184187 82 ntBASIC36.6■■■■□ 3.45
Rtl1Q7M732 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Rtl1Q7M732 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC36.59■■■■□ 3.45
Rtl1Q7M732 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
Rtl1Q7M732 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Rtl1Q7M732 Flvcr1-202ENSMUST00000191946 1216 ntBASIC36.57■■■■□ 3.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms