Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trappc6aQ78XR0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 Gm26571-201ENSMUST00000181399 666 ntBASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trappc6aQ78XR0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trappc6aQ78XR0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trappc6aQ78XR0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trappc6aQ78XR0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Gm27405-201ENSMUST00000184201 112 ntBASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trappc6aQ78XR0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trappc6aQ78XR0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Smad6-203ENSMUST00000179458 273 ntBASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trappc6aQ78XR0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trappc6aQ78XR0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.1■□□□□ 0.81
Trappc6aQ78XR0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms