Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom1Q5SX79 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom1Q5SX79 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom1Q5SX79 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom1Q5SX79 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom1Q5SX79 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom1Q5SX79 Mir7075-201ENSMUST00000184187 82 ntBASIC21.62■■□□□ 1.05
Shroom1Q5SX79 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom1Q5SX79 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom1Q5SX79 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Gm8495-201ENSMUST00000188740 694 ntBASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom1Q5SX79 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Shroom1Q5SX79 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shroom1Q5SX79 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.58■■□□□ 1.05
Shroom1Q5SX79 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shroom1Q5SX79 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.58■■□□□ 1.04
Shroom1Q5SX79 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shroom1Q5SX79 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Gm18284-201ENSMUST00000172604 624 ntBASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Shroom1Q5SX79 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.56■■□□□ 1.04
Shroom1Q5SX79 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom1Q5SX79 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Gm43530-201ENSMUST00000195920 274 ntBASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Gm8493-201ENSMUST00000196881 489 ntBASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Shroom1Q5SX79 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Gm43017-201ENSMUST00000198296 752 ntBASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom1Q5SX79 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms