Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim43aQ3TL54 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43aQ3TL54 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43aQ3TL54 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43aQ3TL54 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim43aQ3TL54 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim43aQ3TL54 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43aQ3TL54 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43aQ3TL54 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43aQ3TL54 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43aQ3TL54 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Trim43aQ3TL54 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43aQ3TL54 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim43aQ3TL54 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.53■■□□□ 1.04
Trim43aQ3TL54 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Trim43aQ3TL54 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim43aQ3TL54 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43aQ3TL54 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43aQ3TL54 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43aQ3TL54 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43aQ3TL54 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43aQ3TL54 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43aQ3TL54 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43aQ3TL54 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.46■■□□□ 1.03
Trim43aQ3TL54 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43aQ3TL54 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43aQ3TL54 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43aQ3TL54 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43aQ3TL54 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43aQ3TL54 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms