Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm15546-201ENSMUST00000122095 826 ntBASIC20.73■□□□□ 0.91
Tubgcp3P58854 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tubgcp3P58854 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubgcp3P58854 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.72■□□□□ 0.91
Tubgcp3P58854 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubgcp3P58854 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.71■□□□□ 0.91
Tubgcp3P58854 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubgcp3P58854 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Tubgcp3P58854 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubgcp3P58854 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.69■□□□□ 0.9
Tubgcp3P58854 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tubgcp3P58854 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Notumos-201ENSMUST00000151998 2659 ntBASIC20.67■□□□□ 0.9
Tubgcp3P58854 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tubgcp3P58854 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.67■□□□□ 0.9
Tubgcp3P58854 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubgcp3P58854 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tubgcp3P58854 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubgcp3P58854 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubgcp3P58854 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubgcp3P58854 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tubgcp3P58854 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tubgcp3P58854 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubgcp3P58854 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tubgcp3P58854 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tubgcp3P58854 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Tubgcp3P58854 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tubgcp3P58854 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tubgcp3P58854 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tubgcp3P58854 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubgcp3P58854 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms