Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCR9P51686 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCR9P51686 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCR9P51686 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCR9P51686 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCR9P51686 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCR9P51686 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCR9P51686 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCR9P51686 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCR9P51686 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCR9P51686 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCR9P51686 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCR9P51686 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.92■□□□□ 0.78
CCR9P51686 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCR9P51686 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCR9P51686 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
CCR9P51686 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.91■□□□□ 0.78
CCR9P51686 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
CCR9P51686 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCR9P51686 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCR9P51686 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCR9P51686 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCR9P51686 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCR9P51686 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CCR9P51686 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.9■□□□□ 0.78
CCR9P51686 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.9■□□□□ 0.78
CCR9P51686 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCR9P51686 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.9■□□□□ 0.78
CCR9P51686 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.9■□□□□ 0.78
CCR9P51686 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.89■□□□□ 0.77
CCR9P51686 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCR9P51686 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCR9P51686 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCR9P51686 ALDH1A3-203ENST00000557963 1670 ntBASIC19.88■□□□□ 0.77
CCR9P51686 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.88■□□□□ 0.77
CCR9P51686 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.88■□□□□ 0.77
CCR9P51686 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCR9P51686 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCR9P51686 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCR9P51686 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCR9P51686 AC131274.2-201ENST00000580697 1507 ntBASIC19.87■□□□□ 0.77
CCR9P51686 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.87■□□□□ 0.77
CCR9P51686 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.87■□□□□ 0.77
CCR9P51686 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCR9P51686 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCR9P51686 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCR9P51686 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.87■□□□□ 0.77
CCR9P51686 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCR9P51686 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCR9P51686 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCR9P51686 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.86■□□□□ 0.77
CCR9P51686 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.86■□□□□ 0.77
CCR9P51686 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCR9P51686 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCR9P51686 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCR9P51686 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCR9P51686 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
CCR9P51686 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCR9P51686 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCR9P51686 AC022616.5-201ENST00000518796 181 ntBASIC19.85■□□□□ 0.77
CCR9P51686 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.85■□□□□ 0.77
CCR9P51686 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCR9P51686 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCR9P51686 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCR9P51686 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCR9P51686 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCR9P51686 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms