Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm7332-201ENSMUST00000118351 454 ntBASIC19.05■□□□□ 0.64
Sox2P48432 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox2P48432 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.05■□□□□ 0.64
Sox2P48432 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox2P48432 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox2P48432 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox2P48432 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox2P48432 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
Sox2P48432 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox2P48432 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox2P48432 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox2P48432 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox2P48432 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox2P48432 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox2P48432 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox2P48432 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox2P48432 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.03■□□□□ 0.64
Sox2P48432 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox2P48432 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox2P48432 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox2P48432 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox2P48432 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Sox2P48432 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.03■□□□□ 0.64
Sox2P48432 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.03■□□□□ 0.64
Sox2P48432 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox2P48432 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox2P48432 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox2P48432 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox2P48432 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.02■□□□□ 0.64
Sox2P48432 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox2P48432 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox2P48432 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sox2P48432 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.02■□□□□ 0.63
Sox2P48432 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.01■□□□□ 0.63
Sox2P48432 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox2P48432 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox2P48432 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox2P48432 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox2P48432 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Sox2P48432 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox2P48432 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox2P48432 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sox2P48432 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox2P48432 Gm43545-201ENSMUST00000196765 2779 ntBASIC19■□□□□ 0.63
Sox2P48432 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox2P48432 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.99■□□□□ 0.63
Sox2P48432 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.99■□□□□ 0.63
Sox2P48432 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox2P48432 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox2P48432 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox2P48432 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox2P48432 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sox2P48432 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox2P48432 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox2P48432 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox2P48432 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sox2P48432 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.98■□□□□ 0.63
Sox2P48432 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.98■□□□□ 0.63
Sox2P48432 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox2P48432 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox2P48432 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox2P48432 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox2P48432 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.97■□□□□ 0.63
Sox2P48432 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox2P48432 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox2P48432 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.97■□□□□ 0.63
Sox2P48432 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox2P48432 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox2P48432 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox2P48432 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.96■□□□□ 0.63
Sox2P48432 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sox2P48432 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Sox2P48432 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox2P48432 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox2P48432 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox2P48432 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox2P48432 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox2P48432 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox2P48432 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox2P48432 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox2P48432 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.94■□□□□ 0.62
Sox2P48432 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox2P48432 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox2P48432 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox2P48432 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox2P48432 Gm11175-201ENSMUST00000116172 543 ntBASIC18.93■□□□□ 0.62
Sox2P48432 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sox2P48432 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox2P48432 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox2P48432 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox2P48432 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.93■□□□□ 0.62
Sox2P48432 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox2P48432 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms